Large Insert DNA Library (LIL)

Organizers:
Hongbin Zhang(Texas A&M University) , David Stelly(Texas A&M University) and Boulos Chalhoub(URGV-INRA)
Date: Saturday, January 14, 2012
Time: 3:50 PM-6:00 PM
Room: Town and Country
Chairs:
David Stelly , Hongbin Zhang and Boulos Chalhoub
3:50 PM
Optimizing the construction of robust physical map in wheat
Romain Philippe, INRA GDEC; Etienne Paux, INRA GDEC; Pierre Sourdille, INRA GDEC; Isabelle Bertin, INRA GDEC; Frederic Choulet, INRA GDEC; Abraham Korol, University of Haifa; Helene Berges, INRA-CNRGV; Sonia Vautrin, INRA-CNRGV; Jan van Oeveren, KeyGene; Keith Stormo, PhD., Amplicon Express; Simone Scalabrin, Instituto di Genomica Applicata; Federica Cattonaro, Instituto di Genomica Applicata; Hana Simkova, Institute of Experimental Botany; Edwin van der Vossen, KeyGene; Jaroslav Dolezel, Institute of Experimental Botany; Catherine Feuillet, INRA GDEC

4:10 PM
Genome Physical Mapping of Polyploids: Construction and Characterization of a BIBAC Physical Map of Cultivated Tetraploid Cotton, Gossypium hirsutum L
Meiping Zhang, Texas A&M University; Yang Zhang, Texas A&M University; James J. Huang, Texas A&M University; Mi-Kyung Lee, Texas A&M University; Xiaojun Zhang, Texas A&M University; David Stelly, Texas A&M University; Hongbin Zhang, Texas A&M University

4:30 PM
The barley physical map – impact of different BAC libraries made of partially digested or randomly sheared genomic DNA
Ruvini T. Ariyadasa, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Thomas Nussbaumer, MIPS/IBIS, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH); Daniela Schulte, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Jesse Poland, Kansas State University; Naser Poursarebani, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Ruonan Zhou, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Burkhard Steuernagel, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Hui Liu, The James Hutton Institute; Pete Hedley, The James Hutton Institute; Robbie Waugh, The James Hutton Institute; Heidrun Gundlach, MIPS/IBIS, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH); Peter Langridge, Australian Centre of Plant Functional Genomics (ACPFG), University of Adelaide; Klaus Mayer, MIPS/IBIS, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH); Uwe Scholz, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Stefan Taudien, Leibniz Institute for Age Research, Fritz Lipmann Institute; Marius Felder, Leibniz Institute for Age Research, Fritz Lipmann Institute; Mattias Platzer, Leibniz Institute for Age Research, Fritz Lipmann Institute; Zeev Frenkel, University of Haifa,Institute of evolution; Abraham Korol, University of Haifa,Institute of Evolution; Kavitha Madishetty, University of California-Riverside; Matthew Moscou, University of California-Riverside; Timothy J. Close, University of California-Riverside; Andreas Graner, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Martin Mascher, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Jens Keilwagen, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Nils Stein, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK)

4:50 PM
Creation and application of BAC/BIBAC resources of cereals
Xue Shi, Huazhong Agricultural University; Haiyan Lin, Huazhong Agricultural University; Chao Wang, Huazhong Agricultural University; Ying Deng, Huazhong Agricultural University; Yonglong Pan, Huazhong Agricultural University; Xiaoming Wang, Huazhong Agricultural University; Yafei Wang, Huazhong Agricultural University; Haiyang Zeng, Huazhong Agricultural University; Lin Liu, Huazhong Agricultural University; Qingli Liu, Huazhong Agricultural University; Haiyan Li, Huazhong Agricultural University; Wentao Xiong, Huazhong Agricultural University; Meizhong Luo, Huazhong Agricultural University

5:10 PM
Mining and mapping of SSR motifs from BAC-end sequences of watermelon
Padma Nimmakayala, Gus R. Douglass Institute and Department of Biology, West Virginia State University; Chantel Scheuring, Texas A&M University; Abhishek Bhandari, Gus R. Douglass Institute and Department of Biology, West Virginia State University; Nischit Aryal, Gus R. Douglass Institute and Department of Biology, West Virginia State University; Gopinath Vajja, Gus R. Douglass Institute and Department of Biology, West Virginia State University; Yang Zhang, Texas A&M University; Hongbin Zhang, Texas A&M University; Umesh Reddy, Gus R. Douglass Institute and Department of Biology, West Virginia State University

5:30 PM
Sequence composition and mapping of BACs of cotton homoeologous chromosomes 11 and 21
Philip Roberts, University of California; Mauricio Ulloa, USDA-ARS, WICS, Res. Unit; Congli Wang, University of California; Christopher Saski, Clemson University Genomics Institute

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