Organizer:
Holly Neibergs(Washington State University)
Date: Sunday, January 15, 2012
Time: 8:00 AM-12:30 PM
Room: San Diego
8:10 AM
Performance of Illumina and Affymetrix Bovine High Density Genotyping Platforms in Holsteins and Jerseys
Gonzalo Rincon, Department of Animal Science, University of California, Davis;
Kristina Weber, University of California, Davis;
Alison Van Eenennaam, Department of Animal Science, University of California, Davis;
Bruce Golden, Dairy Science Department, California Polytechnic State University;
Juan F. Medrano, Department of Animal Science, University of California, Davis
8:30 AM
Differential Gene Expression Detected via Transcriptome Sequencing in Angus Steers Differing for Feed Efficiency
Stephanie McKay, University of Missouri;
Jae Woo Kim, University of Missouri;
Richard Chapple, University of Missouri;
Megan Rolf, University of Missouri;
Duane Keisler, University of Missouri;
John Garbe, University of Minnesota;
Scott C. Fahrenkrug, University of Minnesota;
Cedric Notredame, Centre de Regulacio Genomica (CRG);
Roderic Guigo, Centre de Regulacio Genomica;
Darek Kedra, Centre de Regulacio Genomica;
Ionas Erb, Centre de Regulacio Genomica;
David L. Adelson, University of Adelaide;
Zhipeng Qu, University of Adelaide;
Kristen Taylor, University of Missouri;
Charles Caldwell, University of Missouri;
Kevin Wells, University of Missouri;
Robert Schnabel, University of Missouri;
Jeremy Taylor, University of Missouri
8:50 AM
Whole-Genome Analysis of Taurine and Indicine Cattle
Ryan Doan, Texas A&M University;
Jason Sawyer, Texas A&M AgriLife McGregor Research Center;
Noah Cohen, Texas A&M University;
Richard Person, Baylor College of Medicine;
Noushin Ghaffari, AgriLife Genomics and Bioinformatics Services;
Blake Lambright, AgriLife Genomics and Bioinformatics Services;
Erin Gillenwaters, Texas A&M University;
Charles D. Johnson, AgriLife Genomics and Bioinformatics Services;
James Womack, Texas A&M University;
Scott Dindot, Texas A&M University
9:10 AM
Copy Number Variation of Individual Cattle Genomes using Next Generation Sequencing
Derek Bickhart, USDA, ARS;
Yali Hou, University of Maryland;
Steven G. Schroeder, BFGL, ARS-USDA;
Can Alkan, University of Washington;
Maria Francesca Cardone, University of Bari;
Lakshmi K Matukumalli, NIFA, USDA;
Jiuzhou Song, University of Maryland;
Robert Schnabel, University of Missouri;
Mario Ventura, University of Washington;
Jeremy Taylor, University of Missouri ;
Jose Fernando Garcia, UNESP - Sao Paulo State Univ.;
Curtis Van Tassell, BFGL, ARS-USDA;
Tad Sonstegard, USDA-ARS-ANRI-BFGL;
Evan Eichler, University of Washington;
George Liu, USDA-ARS
9:30 AM
Analysis of the Milk Transcriptome using RNA Sequencing
Juan F. Medrano, Department of Animal Science, University of California, Davis;
Saumya Wickramasinghe, Department of Animal Science, University of California, Davis;
Alma Islas-Trejo, Department of Animal Science, University of California, Davis;
Gonzalo Rincon, Department of Animal Science, University of California, Davis
9:50 AM
Bovine Innate Immune Genomics: Signatures of Selection and Association
Colleen A. Fisher, Texas A&M University;
Eric K. Bhattarai, Texas A&M University;
Jason B. Osterstock, Pfizer Animal Genetics;
Scot E. Dowd, Molecular Research LP;
Paul M. Seabury, ElanTech Inc;
Meenu Vikram, Texas A&M University;
Robert H. Whitlock, University of Pennsylvania;
Ynte H. Schukken, Cornell University;
Robert Schnabel, University of Missouri;
Jeremy Taylor, University of Missouri;
James Womack, Texas A&M University;
Christopher M. Seabury, Texas A&M University
10:30 AM
Angus Genome Project
Robert Schnabel, University of Missouri;
Stephanie McKay, University of Missouri;
Jae Woo Kim, University of Missouri;
Jared Decker, University of Missouri;
Megan Rolf, University of Missouri;
Richard Chapple, University of Missouri;
Holly Ramey, University of Missouri;
Jeremy Taylor, University of Missouri
11:10 AM
Gene Network Analyses of First Service Conception in Brangus Heifers: Use of Genome and Trait Associations, Hypothalamic-Transcriptome Information, and Transcription Factors
Milton Thomas, Colorado State University;
Marina R. S. Fortes, University of Queensland;
Warren M. Snelling, USDA-ARS;
A. Reverter, CSIRO;
S. H. Nagaraj, CSIRO;
Sigrid A. Lehnert, CSIRO;
Rachel J. Hawken, Cobb-Vantress;
Kasey L. DeAtley, New Mexico State University;
Sunday O. Peters, Cornell University;
Gail A. Silver, New Mexico State University;
Gonzalo Rincon, Department of Animal Science, University of California, Davis;
Juan F. Medrano, Department of Animal Science, University of California, Davis;
Alma Islas-Trejo, Department of Animal Science, University of California, Davis
11:30 AM
Goat genome assembly, Availability of an international 50K SNP chip and RH panel : an update of the International Goat Genome Consortium projects
Gwenola Tosser-Klopp, INRA;
Philippe Bardou, INRA;
Cédric Cabau, INRA;
Andre Eggen, Illumina;
Thomas Faraut, Institut National de la Recherche Agronomique ;
Henri Heuven, University of Utrecht;
Saadiah Jamli, MARDI;
Christophe Klopp, INRA;
Cindy Taylor Lawley, Illumina;
John McEwan, AgResearch;
Patrice Martin, INRA;
Carole R. Moreno, INRA;
Philippe Mulsant, INRA;
Ibouniyamine Nabihoudine, INRA;
Eric Pailhoux, INRA;
Isabelle Palhière, INRA;
Rachel Rupp, INRA;
Julien Sarry, INRA;
Brian Sayre, Virginia State University;
Aurélie Tircazes, INRA;
Jun Wang, Bejing Genome Institute;
Wen Wang, Bejing Genome Institute;
Tun-Ping Yu, DNA Landmarks;
Wenguang Zhang, Inner Mongolia Agricultural University
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