2111
Bioinformatics

Date: Tuesday, January 14, 2014
Time: 10:30 AM-12:40 PM
Room: Golden West
Organizers:
Tatiana Tatusova and Aleksey Zimin
10:30 AM
10:50 AM
Improving Genomes Using Long Reads and PBJelly 2
Kim C. Worley, Baylor College of Medicine; Adam C. English, Baylor College of Medicine; Stephen Richards, Baylor College of Medicine; Jeffrey Ross-Ibarra, Baylor College of Medicine; Yi Han, Baylor College of Medicine; Daniel Hughes, Baylor College of Medicine; David Rio Deiros, Baylor College of Medicine; Vanessa Vee, Baylor College of Medicine; Min Wang, Baylor College of Medicine; Eric Boerwinkle, University of Texas Health Science Center; Donna M. Muzny, Baylor College of Medicine; Jeffrey G. Reid, Baylor College of Medicine; Richard A. Gibbs, Baylor College of Medicine

11:10 AM
Gene Structure Prediction – Chasing the Horizon
Mark Borodovsky, Georgia Institute of Technology; Paul D Burns, Georgia Institute of Technology; Hamid R. Hassanzadeh, Georgia Institute of Technology; Alexandre Lomsadze, Georgia Institute of Technology

11:30 AM
11:50 AM
Assembling the Genome Sequence of the Plastids and Mitochondria of the White Spruce (Picea glauca)
Shaun D Jackman, British Columbia Cancer Agency, Genome Sciences Centre; Anthony Raymond, BC Cancer Agency, Genome Sciences Centre; Ben Vandervalk, BC Cancer Agency, Genome Sciences Centre; Hamid Mohamadi, BC Cancer Agency, Genome Sciences Centre; René Warren, BC Cancer Agency, Genome Sciences Centre; Stephen Pleasance, BC Cancer Agency, Genome Sciences Centre; Robin Coope, BC Cancer Agency, Genome Sciences Centre; Macaire M. S. Yuen, University of British Columbia; Christopher Keeling, University of British Columbia; Carol Ritland, University of British Columbia; Jean Bousquet, Université Laval; Alvin Yanchuk, British Columbia Ministry of Forests; Kermit Ritland, University of British Columbia; John MacKay, Université Laval; Steven JM Jones, BC Cancer Agency, Genome Sciences Centre; Joerg C Bohlmann, University of British Columbia; Inanc Birol, BC Cancer Agency, Genome Sciences Centre

12:10 PM
Reducing Assembly Complexity with Single-Molecule Sequencing
Sergey Koren, National Biodefense Analysis and Countermeasures Center; Gregory P Harhay, USDA, ARS, Meat Animal Research Center; Timothy P.L. Smith, USDA, ARS, USMARC; James L Bono, USDA, ARS, Meat Animal Research Center; Dayna M Harhay, USDA, ARS, Meat Animal Research Center; Scott D Mcvey, USDA, ARS, Center for Grain and Animal Health Research; Diana Radune, National Biodefense Analysis and Countermeasures Center; Nicholas H Bergman, National Biodefense Analysis and Countermeasures Center; Adam M Phillippy, National Biodefense Analysis and Countermeasures Center

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