2602
Bioinformatics

Date: Tuesday, January 13, 2015
Time: 10:30 AM-12:40 PM
Room: Golden West
Organizers:
Tatiana Tatusova and Aleksey Zimin
10:30 AM
Perfect Long Read Assembly and the Rise of Pan-Genomics
Michael Schatz, Cold Spring Harbor Laboratory; James Gurtowski, Cold Spring Harbor Laboratory; Sara Goodwin, Cold Spring Harbor Laboratory; Scott Ethe-Sayers, Cold Spring Harbor Laboratory; Panchajanya Deshpande, Cold Spring Harbor Laboratory; Senem Eskipehlivan, Cold Spring Harbor Laboratory; Melissa Kramer, Cold Spring Harbor Laboratory; Hayan Lee, Stony Brook University; Eric Antoniou, Cold Spring Harbor Laboratory; W. Richard McCombie, Cold Spring Harbor Laboratory

10:50 AM
Efficient Assembly of Large Genomes Using Single-Molecule Sequencing and Locality Sensitive Hashing
Konstantin Berlin, University of Maryland; Sergey Koren, National Biodefense Analysis and Countermeasures Center; Jason Chin, Pacific Biosciences; James Drake, Pacific Biosciences; Jane Landolin, Pacific Biosciences; Adam M Phillippy, National Biodefense Analysis and Countermeasures Center

11:10 AM
Rapid De Novo Assembly and Visualization of Plant and Animal Genomes Using Single-Library, PCR-Free, 250-Base Illumina Reads
Iain MacCallum, Broad Institute; Neil Weisenfeld, Broad Institute; Ted Sharpe, Broad Institute; Bayo Lau, Broad Institute; Carsten Russ, Broad Institute; Jessica Alfoldi, Broad Institute; Jeremy Johnson, Broad Institute; Jason Turner-Maier, Broad Institute; Broad Genomics Platform, Broad Institute; Chad Nusbaum, Broad Institute; Kerstin Lindblad-Toh, Broad Institute; David B. Jaffe, Broad Institute

12:10 PM
Nonparametric Methods for Prediction and Analysis of Promoters in Model Organisms
Alyona Kryschenko, University of Southern California; Tatiana Tatarinova, University of Southern California; Martin Triska, Children's Hospital Los Angeles

See more of: Workshops