Computer Demo 2

Talks and demonstrations about software and online resources for supporting and advancing research.
Date: Monday, January 12, 2015
Time: 12:50 PM-3:00 PM
Room: California
Organizers:
Dave Clements and Brian Smith-White
12:50 PM
C08
New Tools for Manual Genome Annotation in Eukaryotes: Zmap/Otterlace and Vega
Toby Hunt, Wellcome Trust Sanger Institute; Jane Loveland, Wellcome Trust Sanger Institute; Jennifer Harrow, Wellcome Trust Sanger Institute

1:10 PM
C09
The Triticeae Toolbox (T3): From the Ground Up
Victoria Carollo Blake, USDA ARS WRRC; David E. Matthews, USDA ARS; Clay Birkett, USDA-ARS; David Hane, University of California / USDA-ARS-WRRC; Jean-Luc Jannink, USDA-ARS / Cornell University

1:30 PM
C10
The Reinvention of MaizeGDB
Carson M Andorf, USDA-ARS Corn Insects and Crop Genetics Research Unit, Iowa State University; Ethalinda Cannon, Iowa State University; John Portwood, USDA-ARS; Abhinav Vinnakota, Iowa State University; Venkatanaga Sribalusu, Iowa State University; Lisa Harper, USDA ARS; Mary Schaeffer, USDA ARS and University of Missouri; Jack Gardiner, Plant Genomics Outreach Consortium; Bremen M Braun, MaizeGDB; Darwin Campbell, Iowa State University; Jacqueline Richter, Iowa State University; Wimalanathan (Gokul) Kokulapalan, Iowa State University; Taner Z. Sen, USDA -ARS /Iowa State University; Carolyn J. Lawrence-Dill, Department of Genetics, Development and Cell Biology and Department of Agronomy,Iowa State University

1:50 PM
C11
Methods for Collecting, Integrating, and Displaying Complex Genetic Data, Using the Legume Information System and PeanutBase
Steven B. Cannon, USDA-ARS-CICGRU; Andrew D. Farmer, National Center for Genome Resources (NCGR); Scott R. Kalberer, USDA-ARS-CICGRU; Jugpreet Singh, ORISE Fellow, USDA-ARS-CICGRU; Ethalinda Cannon, Iowa State University; Pooja E. Umale, National Center for Genome Resources (NCGR); Hrishikesh Lokhande, NCGR; Alan Cleary, NCGR; Nathan T. Weeks, USDA-ARS-CICGRU; Vijay Karingula, Iowa State University; Sudhansu Dash, Virtual Reality Application Center

2:10 PM
C12
Facilitating the Use of Next-Gen Sequence Data for Data-Driven Biology
Tazro Ohta, Database Center for Life Science; Hiromasa Ono, Database Center for Life Science; Yuki Naito, Database Center for Life Science; Takeru Nakazato, Database Center for Life Science; Hidemasa Bono, Database Center for Life Science

2:30 PM
C13
How to Use GDR, the Genome Database for Rosaceae
Sook Jung, Washington State University; Stephen P. Ficklin, Washington State University; Taein Lee, Washington State University; Chun-Huai Cheng, Washington State University; Anna Blenda, Genetics and Biochemistry, Clemson University; Jing Yu, Washington State University; Ping Zheng, Washington State University; Sushan Ru, Washington State University; Cameron Peace, Washington State University; Katherine M. Evans, Washington State University; Nnadozie Oraguzie, Washington State University; Lisa DeVetter, Washington State University; Albert G. Abbott, Clemson University; Ksenija Gasic, Clemson University; Mercy Olmstead, University of Florida; Dorrie Main, Washington State University

2:45 PM
C14
CottonGen: The Community Database for Cotton Genomics, Genetics and Breeding Research
Jing Yu, Washington State University; Sook Jung, Washington State University; Chun-Huai Cheng, Washington State University; Stephen P. Ficklin, Washington State University; Taein Lee, Washington State University; Ping Zheng, Washington State University; Don C. Jones, Cotton Incorporated; Richard G. Percy, USDA-ARS, Southern Plains Agricultural Research Center; Dorrie Main, Washington State University

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