Computer Demo 4

Talks and demonstrations about software and online resources for supporting and advancing research.
Date: Wednesday, January 14, 2015
Time: 10:30 AM-12:40 PM
Room: California
Organizers:
Dave Clements and Brian Smith-White
10:30 AM
C24
Bioinformatic Analysis of Genotype By Sequencing (GBS) Data with NGSEP
Claudia Samantha Perea de La Torre, International Center for Tropical Agriculture (CIAT); Juan Fernando De la Hoz, International Center for Tropical Agriculture (CIAT); Juan Camilo Quintero, International Center for Tropical Agriculture (CIAT); Daniel F. Cruz, International Center for Tropical Agriculture (CIAT); Jorge A. Duitama Castellanos, International Center for Tropical Agriculture (CIAT)

10:50 AM
C25
Flotilla: An Open-Source Toolkit for Single-Cell RNA-Seq Data Analysis
Michael T. Lovci, University of California, San Diego; Olga B. Botvinnik, University of California, San Diego; Patrick Liu, University of California, San Diego; Boyko Kakaradov, University of California, San Diego; Leen Jamal Schafer, University of California, San Diego; Yan Song, University of California, San Diego; Gene W. Yeo, University of California, San Diego

11:10 AM
C26
The STATegra NGS Experiment Management System
Ana Conesa, Centro Investigacion Principe Felipe

11:50 AM
C30
DNA Polymorphism Database from New-Generation Sequence Read Archive and Analytical Workflow
Takako Mochizuki, Genome Informatics Laboratory, NIG, ROIS; Yasuhiro Tanizawa, Genome Informatics Laboratory, NIG, ROIS; Takatomo Fujisawa, Genome Informatics Laboratory, NIG, ROIS; Naruo Nikoh, Liberal Arts, OUJ; Atsushi Toyoda, Comparative Genomics laboratory, NIG, ROIS; Asao Fujiyama, Comparative Genomics laboratory, NIG, ROIS; Nori Kurata, Plant Genetics Laboratory, National Institue of Genetics; Hideki Nagasaki, Genome Informatics Laboratory, NIG, ROIS; Tokurou Shimizu, NARO Institute of Fruit Tree Science; Eli Kaminuma, Genome Informatics Laboratory, NIG, ROIS; Yasukazu Nakamura, Genome Informatics Laboratory, NIG, ROIS

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