3057
Bioinformatics

Date: Tuesday, January 12, 2016
Time: 10:30 AM-12:40 PM
Room: Golden West
Organizers:
Tatiana Tatusova and Aleksey Zimin
10:30 AM
10:50 AM
Un-zipping Diploid Genome Revealing the Heterozygous Variants From Comprehensive Haplotig Assembly
Jason Chin, Pacific Biosciences; Paul Peluso, Pacific Biosciences; David Rank, Pacific Biosciences; Maria Nattestad, Cold Spring Harbor Laboratory; Fritz J. Sedlazeck, Cold Spring Harbor Laboratory; Michael Schatz, Cold Spring Harbor Laboratory; Alex Copeland, DOE Joint Genome Institute; Alicia Clum, DOE Joint Genome Institute; Kerrie W. Barry, DOE Joint Genome Institute; Joseph Ecker, Salk Institute for Biological Studies & Howard Hughes Medical Institute; Ronan O'Malley, Salk Institute for Biological Studies & Howard Hughes Medical Institute; Chongyuan Luo, Salk Institute for Biological Studies & Howard Hughes Medical Institute

11:10 AM
MAKER: The Easy-to-use Genome Annotation Pipeline
M. Yandell, Department of Human Genetics, University of Utah

11:30 AM
GeneMark Family of Gene Prediction Tools for Prokaryotic and Eukaryotic Genomes
Mark Borodovsky, Georgia Institute of Technology; Shiyuyun Tang, Georgia Institute of Technology; Alexandre Lomsadze, Georgia Institute of Technology

11:50 AM
A Widespread, Comparative Assessment of LTR-Retrotransposons - the Major Components of Plant Genomes
Heidrun Gundlach, Helmholtz Center Munich - Plant Genome and Systems Biology PGSB; Klaus F.X. Mayer, Helmholtz Center Munich - Plant Genome and Systems Biology

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