Sugar Cane Sequencing Initiative

Date: Sunday, January 10, 2016
Time: 1:30 PM-3:40 PM
Room: Royal Palm Salon 1-2
Glaucia M. Souza , Robert Henry and Ray Ming
1:30 PM
The Genome Sequence of a Sugarcane Hybrid: Exploring Genes, Alleles and Transcripts
Carolina Gimiliani Lembke, Institute of Chemistry - University of São Paulo; Pablo Andrade, Institute of Chemistry - University of São Paulo; Hayan Lee, Microsoft Research; Gabriel Rodrigues Alves Margarido, USP / ESALQ; Milton Y. Nishiyama Junior, University of São Paulo; Savio S. Ferreira, Institute of Chemistry - University of São Paulo; Ravi Pandya, Microsoft Research; Jonas W. Gaiarsa, GaTE Lab - University of São Paulo; Michael Schatz, Cold Spring Harbor Laboratory; David Heckerman, Microsoft; Robert Davidson, Microsoft Research; Marie-Anne Van Sluys, Universidade de São Paulo; Glaucia M. Souza, Universidade de São Paulo (USP)

1:50 PM
Sugarcane Moleculo Contigs into Chromosome Cluster Clouds
Jonas W. Gaiarsa, GaTE Lab - University of São Paulo; Gabriel Rodrigues Alves Margarido, ESALQ - University of São Paulo; Marie-Anne Van Sluys, Universidade de São Paulo

2:10 PM
The Sugarcane Chloroplast Genome: A Next Generation Sequencing Perspective
Nam Van Hoang, University of Queensland QAAFI; Agnelo Furtado, University of Queensland/QAAFI; Richard B. McQualter, University of Queensland QAAFI; Robert J. Henry, University of Queensland/QAAFI

2:30 PM
Long Read Sequencing Technology to Solve Complex Genomic Regions Assembly in Plants
Helene Berges, Plant Genomic Center - INRA Toulouse; Arnaud Bellec, INRA - CNRGV; Audrey Courtial, INRA - CNRGV; Nathalie Rodde, INRA - CNRGV; Stephane Cauet, INRA - CNRGV; Sonia Vautrin, INRA - CNRGV; Genséric Beydon, INRA - CNRGV; William Marande, INRA - CNRGV; Yves Barriere, INRA

2:50 PM
Genomic Selection on a Sugarcane Breeding Population Using High-Throughput Sequence Capture Genotyping
Marcio Resende, RAPiD Genomics LLC; Leandro G Neves, RAPiD Genomics LLC; Ivone de Bem Oliveira, Universidade Federal de Goias; Clistiane dos Anjos Mendes, Universidade Federal de Goias; Ludmila F. Bandeira, Universidade Federal de Goias; Alexandre S. G. Coelho, Universidade Federal de Goias

3:10 PM
Sugarcane is an Ancient Allopolyploid
Changsoo Kim, Department of Crop Science, Chungnam National University; Hui Guo, University of Georgia; Andrew H. Paterson, Plant Genome Mapping Laboratory, University of Georgia

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