Bioinformatics

Organizer:
Tatiana Tatusova(NCBI/NLM/NIH)
Date: Tuesday, January 17, 2012
Time: 10:20 AM-12:30 PM
Room: Golden West
10:20 AM
11:00 AM
Bioinformatic Analyses of an Alien Chromosome in Rye
Mihaela M. Martis, German Research Center for Environmental Health, Helmholtz Zentrum Munich, Institute of Bioinformatics & Systems Biology, MIPS; Sonja Klemme, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Ali M. Banaei Moghaddam, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Frank R. Blattner, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Jiri Macas, Biology Centre ASCR, Institute of Plant Molecular Biology; Thomas Schmutzer, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK); Uwe Scholz, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Heidrun Gundlach, German Research Center for Environmental Health, Helmholtz Zentrum Munich, Institute of Bioinformatics & Systems Biology, MIPS; Thomas Wicker, University of Zurich; Hana Simkova, Institute of Experimental Botany; Petr Novak, Biology Centre ASCR, Institute of Plant Molecular Biology; Pavel Neumann, Biology Centre ASCR, Institute of Plant Molecular Biology; Marie Kubalįkovį, Institute of Experimental Botany; Eva Bauer, Technische Universität München, Plant Breeding; Grit Haseneyer, Technische Universität München, Plant Breeding; Joerg Fuchs, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Jaroslav Dole˛el, Institute of Experimental Botany; Nils Stein, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK); Klaus Mayer, German Research Center for Environmental Health, Helmholtz Zentrum Munich, Institute of Bioinformatics & Systems Biology, MIPS ; Andreas Houben, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK)

11:20 AM
Comprehensive expression analysis of retrogenes in rice
Hiroaki Sakai, National Institute of Agrobiological Sciences; Hiroshi Mizuno, National Institute of Agrobiological Sciences; Yoshihiro Kawahara, National Institute of Agrobiological Sciences; Hironobu Wakimoto, Hitachi Government & Public Corporation System Engineering, Ltd; Hiroshi Ikawa, Mitsubishi Space Software Co., Ltd.; Hiroyuki Kawahigashi, National Institute of Agrobiological Sciences; Hiroyuki Kanamori, National Institute of Agrobiological Sciences; Takashi Matsumoto, National Institute of Agrobiological Sciences; Takeshi Itoh, National Institute of Agrobiological Sciences; Brandon S. Gaut, University of California, Irvine

11:40 AM
Efficient assembly of large genomes from short reads
Aleksey Zimin, University of Maryland; James A Yorke, University of Maryland; Guillaume Marcais, University of Maryland; Michael Roberts, Univeristy of Maryland; Steven L Salzberg, Johh Hopkins University School of Medicine

12:00 PM
Extracting and screening synteny blocks in genome comparisons
Haibao Tang, J. Craig Venter Institute; Eric Lyons, iPlant Collaborative/University of AZ; Brent Pedersen, Center for Genes, Environment and Health, National Jewish Health; James C. Schnable, University of California-Berkeley; Tae-Ho Lee, Plant Genome Mapping Lab - University of Georgia; Andrew Paterson, Plant Genome Mapping Lab - University of Georgia; Michael Freeling, University of California-Berkeley

See more of: Workshops