Organizer:
Tatiana Tatusova(NCBI/NLM/NIH)
Date: Tuesday, January 17, 2012
Time: 10:20 AM-12:30 PM
Room: Golden West
11:00 AM
Bioinformatic Analyses of an Alien Chromosome in Rye
Mihaela M. Martis, German Research Center for Environmental Health, Helmholtz Zentrum Munich, Institute of Bioinformatics & Systems Biology, MIPS;
Sonja Klemme, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK);
Ali M. Banaei Moghaddam, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK);
Frank R. Blattner, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK);
Jiri Macas, Biology Centre ASCR, Institute of Plant Molecular Biology;
Thomas Schmutzer, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK);
Uwe Scholz, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK);
Heidrun Gundlach, German Research Center for Environmental Health, Helmholtz Zentrum Munich, Institute of Bioinformatics & Systems Biology, MIPS;
Thomas Wicker, University of Zurich;
Hana Simkova, Institute of Experimental Botany;
Petr Novak, Biology Centre ASCR, Institute of Plant Molecular Biology;
Pavel Neumann, Biology Centre ASCR, Institute of Plant Molecular Biology;
Marie Kubalįkovį, Institute of Experimental Botany;
Eva Bauer, Technische Universität München, Plant Breeding;
Grit Haseneyer, Technische Universität München, Plant Breeding;
Joerg Fuchs, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK);
Jaroslav Dole˛el, Institute of Experimental Botany;
Nils Stein, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK);
Klaus Mayer, German Research Center for Environmental Health, Helmholtz Zentrum Munich, Institute of Bioinformatics & Systems Biology, MIPS ;
Andreas Houben, Leibniz- Institute of Plant Genetics and Crop Plant Research (IPK)
11:20 AM
Comprehensive expression analysis of retrogenes in rice
Hiroaki Sakai, National Institute of Agrobiological Sciences;
Hiroshi Mizuno, National Institute of Agrobiological Sciences;
Yoshihiro Kawahara, National Institute of Agrobiological Sciences;
Hironobu Wakimoto, Hitachi Government & Public Corporation System Engineering, Ltd;
Hiroshi Ikawa, Mitsubishi Space Software Co., Ltd.;
Hiroyuki Kawahigashi, National Institute of Agrobiological Sciences;
Hiroyuki Kanamori, National Institute of Agrobiological Sciences;
Takashi Matsumoto, National Institute of Agrobiological Sciences;
Takeshi Itoh, National Institute of Agrobiological Sciences;
Brandon S. Gaut, University of California, Irvine
11:40 AM
Efficient assembly of large genomes from short reads
Aleksey Zimin, University of Maryland;
James A Yorke, University of Maryland;
Guillaume Marcais, University of Maryland;
Michael Roberts, Univeristy of Maryland;
Steven L Salzberg, Johh Hopkins University School of Medicine
12:00 PM
Extracting and screening synteny blocks in genome comparisons
Haibao Tang, J. Craig Venter Institute;
Eric Lyons, iPlant Collaborative/University of AZ;
Brent Pedersen, Center for Genes, Environment and Health, National Jewish Health;
James C. Schnable, University of California-Berkeley;
Tae-Ho Lee, Plant Genome Mapping Lab - University of Georgia;
Andrew Paterson, Plant Genome Mapping Lab - University of Georgia;
Michael Freeling, University of California-Berkeley