Gene Expression Analysis

Organizers:
David Galbraith(University of Arizona) and Gregory D. May(National Center for Genome Resources)
Date: Tuesday, January 17, 2012
Time: 3:50 PM-6:00 PM
Room: Pacific Salon 3
Chair:
David Galbraith
3:50 PM
Introduction to the Workshop (Gregory D. May )


4:20 PM
Routine Digital Methylation Profiling of Population Cohorts with Bisulfite Padlock Probes
Nongluk Plongthongkum, University of California at San Diego; Dihn Diep, Department of Bioengineering, and Bioinformatics and System Biology Graduate Program, University of California, San Diego; Arthurva Gore, Departmetn fo Bioengineering, University of California, San Diego; Ho-Lim Fung, Department of Bioengineering, University of California, San Diego; Robert Shoemaker, Department of Chemistry and Biochemistry, University of California, San Diego; Kun Zhang, Department of Bioengineering, University of California, San Diego

4:40 PM
5:00 PM
Interactions Between the Genome and Epigenome in Arabidopsis Accessions
Ronan O'Malley, The Salk Institute; Thomas Ng, The Salk Institute; Ryan Lister, The Salk Institute; James Knight, 454 Life Sciences; Rosa Castanon, The Salk Institute; Jason Affourtit, 454 Life Sciences; Anna Bartlett, The Salk Institute; Maithreyan Srinivasan, 454 Life Sciences; Jarrod Chapman, DOE Joint Genome Institute; Dan Rokhsar, DOE Joint Genome Institute; J. Michael Egholm, 454 Life Sciences; Tim Harkins, Life Technologies; Joseph Ecker, The Salk Institute

5:20 PM
RNA-Seq Applications on the Ion Torrent PGM
Kelli Bramlett, Life Technologies; Jeff Schageman, Life Technologies; Luming Qu, Life Technologies; Jose Cienfuegos, Life Technologies; Bob Setterquist, Life Technologies

5:40 PM
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