Computational Gene Discovery

Organizer:
Mark Borodovsky(Georgia Tech)
Date: Tuesday, January 17, 2012
Time: 3:50 PM-6:00 PM
Room: Royal Palm Salon 1,2,3
Chair:
Mark Borodovsky
3:50 PM
W193
From Hosts to Symbionts: Integrated Gene Prediction for Prokaryotic Genomes using EuGene
Erika Sallet, Laboratoire Interactions Plantes Micro-organismes, INRA/CNRS; Jérôme Gouzy, Laboratoire Interactions Plantes Micro-organismes, INRA/CNRS; Brice Roux, Laboratoire Interactions Plantes Micro-organismes, INRA/CNRS; Delphine Capela, Laboratoire Interactions Plantes Micro-organismes, INRA/CNRS; Laurant Sauviac, Laboratoire Interactions Plantes Micro-organismes, INRA/CNRS; Claude Bruand, Laboratoire Interactions Plantes Micro-organismes, INRA/CNRS; Pascal Gamas, Laboratoire Interactions Plantes Micro-organismes, INRA/CNRS; Thomas Schiex, INRA - Unité de Biométrie et d'Intelligence Artificielle UR 875

4:10 PM
W194
Using RNA-Seq in Multi-Genome Gnomon for Fungal Genomes Annotation
Alexandre Souvorov, NIH/HLM/NCBI

4:30 PM
W195
The AUGUSTUS Eukaryotic RNA-Seq-based Gene Prediction Pipeline
Mario Stanke, University of Greifswald

4:50 PM
W196
Proteogenomics: Discovering Novel Genes Using Mass Spectrometry
Natalie Castellana, University of California San Diego

5:10 PM
W197
Ab initio Gene Finding in Compositionally Heterogeneous Eukaryotic Genomes
Alexandre Lomsadze, Georgia Tech; Mark Borodovsky, Georgia Tech

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